Journal: Oncogene
Article Title: Targeting epiregulin in the treatment-damaged tumor microenvironment restrains therapeutic resistance
doi: 10.1038/s41388-022-02476-7
Figure Lengend Snippet: a Schematic of putative NF-κB binding sites in the proximal region of EREG promoter. A set of reporter constructs was generated by sequential cloning of the promoter fragments into a pGL4.22 vector (pGL-EREG-P01 to P05) that expresses firefly luciferase. Numeric numbers on the top denote the core site of each putative NF-κB binding motif, while numbers at the left mark the length of each segmental promoter clone. TSS transcription start site. Lower-left inlet, consensus binding motif of the NF-κB subunit p65. b Assessment of luciferase activities upon exposure of 293F cells pre-transfected with the individual EREG promoter constructs to TNF-α at 40 ng/ml in culture. The empty vector was used as a negative control, while a construct NAT11-Luc2CP encoding multiple copies of typical NF-κB binding sequences and an optimized IL-2 minimal promoter served as a positive control. Signals were presented as relative ratios of firefly/renilla luciferase activities. c Luciferase activity assay with lysates of PSC27 cells pre-transfected with each of the constructs used in b prior to treatment by 50 μg/ml bleomycin (BLEO) in culture. d Chromatin immunoprecipitation (ChIP) was performed to identify potential NF-κB binding sites in the proximal promoter of EREG. Left, EREG-p2/p3/p4/p5 denotes four representative genomic sites in EREG promoter region, while selective NF-κB binding sites from IL6 and CXCL8 served as positive controls. e EREG and MMP3 transcript expression in PSC27 cells exposed to BLEO, MIT (mitoxantrone) or DOX (doxorubicin), with or without the NF-κB inhibitor BAY (Bay 11-7982, 5 μM). Signals were normalized to untreated cells, with MMP3 expression analyzed as positive control. f The reporter construct pGL-EREG-P05 was transiently transfected into PSC27 cells before treatment by BLEO. BAY (5 μM), BA (betulinic acid, 10 μM), T-5224 (10 μM) were applied with BLEO as small molecule inhibitors against NF-κB, C/EBP family and AP-1, respectively. SR (SR 11302, 3 μM), a positive control inhibitor against AP-1. Cells were lysed 7 days after treatment, with lysates subject to luciferase activity assay. g PSC27 cells were treated in the same conditions as described in f , with lysates collected for total RNA preparation and subject to quantitative RT-PCR analysis. Expression of EREG (left), IL6 (mid) or CXCL8 (right) was compared between CTLR (untreated), Mock (PBS-treated), BAY, BA, T-5224 and SR treatment groups. Cells were damaged by BLEO (50 μg/ml) or VBL (vinblastine, 20 nM) treatment. h Immunoblot analysis of DDR signaling (ATM), p38MAPK activation, cellular senescence (p16, p21) and NF-κB activation (p65) in PSC27 cells treated by various chemotherapeutic agents as indicated. GAPDH, loading control. i Immunoblot analysis Expression assay of p65 nuclear translocation in PSC27 cells treated by VBL, PTX, BLEO or MIT, individually. C cytoplasmic, N Nuclear. Histone H3, loading control for nuclear proteins. Note, the relative signal intensities (RSI, presented as percentage) of p65 were quantified as the virtual intensity of an individual sample after scanning, and calculated in relative to that of the strongest signal (BLEO, C for the p65 blot). j Presentation of p65-specific ChIP-seq tracks of the gene locus of several SASP hallmarks and senescence-associated factors. Illustrations were prepared from datasets deposited in the GEO (accession number GSE141992), with raw data available at publicly released sources . Data are representative of three independent experiments. All p values were calculated by Student’s t tests. ^ p > 0.05, * p < 0.05, ** p < 0.01, *** p < 0.001.
Article Snippet: Primary normal human prostate stromal cell line PSC27, breast stromal cell line HBF1203 and lung stromal cell line HFL1 (ATCC) were maintained in stromal complete medium as described [ ].
Techniques: Binding Assay, Construct, Generated, Cloning, Plasmid Preparation, Luciferase, Transfection, Negative Control, Positive Control, Activity Assay, Chromatin Immunoprecipitation, Expressing, Quantitative RT-PCR, Western Blot, Activation Assay, Control, Translocation Assay, ChIP-sequencing